IMP.bff
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PathMap Member List

This is the complete list of members for PathMap, including all inherited members.

fill_sphere(IMP::algebra::Vector3D r0, double radius, double value, bool inverse=true)PathMap
find_path(long path_begin_idx, long path_end_idx=-1, int heuristic_mode=0)PathMap
find_path_astar(long path_begin_idx, long path_end_idx=-1)PathMap
find_path_dijkstra(long path_begin_idx, long path_end_idx=-1)PathMap
get_dim_index_by_voxel(long index, int dim)PathMap
get_edges(int tile_idx)PathMapprotected
get_neighbor_idx_offsets(double neighbor_radius=-1)PathMapinline
get_path_map_header() constPathMapinline
get_path_map_header_writable()PathMapinline
get_tile_values(int value_type=PM_TILE_COST, std::pair< float, float > bounds=std::pair< float, float >({std::numeric_limits< float >::min(), std::numeric_limits< float >::max()}), const std::string &feature_name="")PathMaprelated
get_tile_values(float **output, int *nx, int *ny, int *nz, int value_type=PM_TILE_COST, std::pair< float, float > bounds=std::pair< float, float >({std::numeric_limits< float >::min(), std::numeric_limits< float >::max()}), const std::string &feature_name="")PathMap
get_tiles()PathMap
get_xyz_density()PathMap
get_xyz_density(double **output, int *n_output1, int *n_output2)PathMap
offsets_PathMapprotected
PathMap(PathMapHeader &header, std::string name="PathMap%1%", IMP::em::KernelType kt=IMP::em::BINARIZED_SPHERE, float resolution=-1.0)PathMapexplicit
pathMapHeader_PathMapprotected
resize(unsigned int nvox)PathMap
sample_obstacles(double extra_radius=0.0)PathMap
set_data(double *input, int n_input, float obstacle_threshold=-1, bool binarize=true, float obstacle_penalty=TILE_PENALTY_DEFAULT)PathMap
set_path_map_header(PathMapHeader &path_map_header, float resolution=-1.0)PathMap
tilesPathMapprotected
update_tiles(float obstacle_threshold=-1.0, bool binarize=true, float obstacle_penalty=TILE_PENALTY_DEFAULT, bool reset_tile_edges=true)PathMap