AVPairDistanceMeasurement Class Reference

Container for experimental distance measurement. More...

#include <AV.h>

Collaboration diagram for AVPairDistanceMeasurement:

Public Member Functions
std::string	get_json ()
	Get a JSON string.
double	score_model (double model)
	Score a model distance against the experimental distance.

Public Attributes
double	distance = -1
double	error_neg = -1
double	error_pos = -1
double	forster_radius = 52.0
int	distance_type = IMP::bff::DYE_PAIR_DISTANCE_MEAN
std::string	position_1
std::string	position_2

Detailed Description

Container for experimental distance measurement.

Member Function Documentation

get_json()

std::string AVPairDistanceMeasurement::get_json

(

)

Get a JSON string.

score_model()

double AVPairDistanceMeasurement::score_model

(

double

model

)

Score a model distance against the experimental distance.

Parameters

model

The model distance to be scored.

Returns

The score of the model distance.

Member Data Documentation

distance

double AVPairDistanceMeasurement::distance = -1

distance_type

int AVPairDistanceMeasurement::distance_type = IMP::bff::DYE_PAIR_DISTANCE_MEAN

error_neg

double AVPairDistanceMeasurement::error_neg = -1

error_pos

double AVPairDistanceMeasurement::error_pos = -1

forster_radius

double AVPairDistanceMeasurement::forster_radius = 52.0

position_1

std::string AVPairDistanceMeasurement::position_1

position_2

std::string AVPairDistanceMeasurement::position_2

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The documentation for this class was generated from the following file:

• /Users/tpeulen/dev/imp.bff/include/AV.h