User manual

• Structural modeling
  • Path search
  • Accessible Volumes
• Fluorescence correlation spectroscopy
  • Fluorescence correlation spectroscopy analysis in ChiSurf
• Time-resolved fluorescence spectroscopy
  • Fluorescence decay curves
  • Fluorescence decay forward model
  • Fluorescence decay objective function
  • Fluorescence decay analysis in ChiSurf
• Single molecule spectroscopy
  • Simulating confocal smFRET experiments

Note

Doctest Mode

The code-examples in the above tutorials are written in a python-console format. If you wish to easily execute these examples in IPython, use:

%doctest_mode

in the IPython-console. You can then simply copy and paste the examples directly into IPython without having to worry about removing the >>> manually.